Structure and function of Pif1 helicase

Biochem Soc Trans. 2017 Oct 15;45(5):1159-1171. doi: 10.1042/BST20170096. Epub 2017 Sep 12.

Abstract

Pif1 family helicases have multiple roles in the maintenance of nuclear and mitochondrial DNA in eukaryotes. Saccharomyces cerevisiae Pif1 is involved in replication through barriers to replication, such as G-quadruplexes and protein blocks, and reduces genetic instability at these sites. Another Pif1 family helicase in S. cerevisiae, Rrm3, assists in fork progression through replication fork barriers at the rDNA locus and tRNA genes. ScPif1 (Saccharomyces cerevisiae Pif1) also negatively regulates telomerase, facilitates Okazaki fragment processing, and acts with polymerase δ in break-induced repair. Recent crystal structures of bacterial Pif1 helicases and the helicase domain of human PIF1 combined with several biochemical and biological studies on the activities of Pif1 helicases have increased our understanding of the function of these proteins. This review article focuses on these structures and the mechanism(s) proposed for Pif1's various activities on DNA.

Keywords: DNA; G-quadruplex; enzyme kinetics; enzyme–substrate interactions; helicase; mtDNA.

Publication types

  • Review

MeSH terms

  • Bacteria / chemistry
  • Bacteria / enzymology
  • Crystallography, X-Ray
  • DNA / chemistry
  • DNA / metabolism*
  • DNA Helicases / chemistry*
  • DNA Helicases / metabolism*
  • DNA Replication
  • G-Quadruplexes
  • Humans
  • Models, Molecular
  • Protein Structure, Quaternary
  • Saccharomyces cerevisiae / chemistry
  • Saccharomyces cerevisiae / enzymology
  • Saccharomyces cerevisiae Proteins / chemistry
  • Saccharomyces cerevisiae Proteins / metabolism

Substances

  • Saccharomyces cerevisiae Proteins
  • DNA
  • PIF1 protein, S cerevisiae
  • DNA Helicases
  • PIF1 protein, human