The ATPase Fap7 Tests the Ability to Carry Out Translocation-like Conformational Changes and Releases Dim1 during 40S Ribosome Maturation

Mol Cell. 2017 Sep 21;67(6):990-1000.e3. doi: 10.1016/j.molcel.2017.08.007. Epub 2017 Sep 7.

Abstract

Late in their maturation, nascent small (40S) ribosomal subunits bind 60S subunits to produce 80S-like ribosomes. Because of the analogy of this translation-like cycle to actual translation, and because 80S-like ribosomes do not produce any protein, it has been suggested that this represents a quality control mechanism for subunit functionality. Here we use genetic and biochemical experiments to show that the essential ATPase Fap7 promotes formation of the rotated state, a key intermediate in translocation, thereby releasing the essential assembly factor Dim1 from pre-40S subunits. Bypassing this quality control step produces defects in reading frame maintenance. These results show how progress in the maturation cascade is linked to a test for a key functionality of 40S ribosomes: their ability to translocate the mRNA⋅tRNA pair. Furthermore, our data demonstrate for the first time that the translation-like cycle is a quality control mechanism that ensures the fidelity of the cellular ribosome pool.

Keywords: 80S-like ribosome; Dim1; Fap7; quality control; ribosome assembly; translocation.

MeSH terms

  • Adenylate Kinase / chemistry
  • Adenylate Kinase / genetics
  • Adenylate Kinase / metabolism*
  • Frameshifting, Ribosomal*
  • Genotype
  • Methyltransferases / chemistry
  • Methyltransferases / genetics
  • Methyltransferases / metabolism*
  • Models, Molecular
  • Nuclear Proteins / chemistry
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Nucleoside-Triphosphatase / chemistry
  • Nucleoside-Triphosphatase / genetics
  • Nucleoside-Triphosphatase / metabolism*
  • Phenotype
  • Protein Binding
  • Protein Conformation
  • Proteolysis
  • Ribosome Subunits, Small, Eukaryotic / chemistry
  • Ribosome Subunits, Small, Eukaryotic / enzymology*
  • Ribosome Subunits, Small, Eukaryotic / genetics
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae Proteins / chemistry
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Structure-Activity Relationship
  • Time Factors

Substances

  • Nuclear Proteins
  • Saccharomyces cerevisiae Proteins
  • DIM1 protein, S cerevisiae
  • Methyltransferases
  • Adenylate Kinase
  • FAP7 protein, S cerevisiae
  • Nucleoside-Triphosphatase