Lessons from single-cell transcriptome analysis of oxygen-sensing cells

Cell Tissue Res. 2018 May;372(2):403-415. doi: 10.1007/s00441-017-2682-0. Epub 2017 Sep 8.

Abstract

The advent of single-cell RNA-sequencing (RNA-Seq) technology has enabled transcriptome profiling of individual cells. Comprehensive gene expression analysis at the single-cell level has proven to be effective in characterizing the most fundamental aspects of cellular function and identity. This unbiased approach is revolutionary for small and/or heterogeneous tissues like oxygen-sensing cells in identifying key molecules. Here, we review the major methods of current single-cell RNA-Seq technology. We discuss how this technology has advanced the understanding of oxygen-sensing glomus cells in the carotid body and helped uncover novel oxygen-sensing cells and mechanisms in the mice olfactory system. We conclude by providing our perspective on future single-cell RNA-Seq research directed at oxygen-sensing cells.

Keywords: Arterial chemoreceptor; Carotid body glomus cell; Hypoxia; Next-generation sequencing; Olfactory sensory neuron type B cell.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Animals
  • Carotid Body / metabolism
  • Gene Expression Profiling*
  • Humans
  • Olfactory Receptor Neurons / metabolism
  • Oxygen / metabolism*
  • Single-Cell Analysis*

Substances

  • Oxygen