Glucose-1-phosphate uridylyltransferase from Erwinia amylovora: Activity, structure and substrate specificity

Biochim Biophys Acta Proteins Proteom. 2017 Nov;1865(11 Pt A):1348-1357. doi: 10.1016/j.bbapap.2017.08.015. Epub 2017 Aug 24.

Abstract

Erwinia amylovora, a Gram-negative plant pathogen, is the causal agent of Fire Blight, a contagious necrotic disease affecting plants belonging to the Rosaceae family, including apple and pear. E. amylovora is highly virulent and capable of rapid dissemination in orchards; effective control methods are still lacking. One of its most important pathogenicity factors is the exopolysaccharide amylovoran. Amylovoran is a branched polymer made by the repetition of units mainly composed of galactose, with some residues of glucose, glucuronic acid and pyruvate. E. amylovora glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase, EC 2.7.7.9) has a key role in amylovoran biosynthesis. This enzyme catalyses the production of UDP-glucose from glucose-1-phosphate and UTP, which the epimerase GalE converts into UDP-galactose, the main building block of amylovoran. We determined EaGalU kinetic parameters and substrate specificity with a range of sugar 1-phosphates. At time point 120min the enzyme catalysed conversion of the sugar 1-phosphate into the corresponding UDP-sugar reached 74% for N-acetyl-α-d-glucosamine 1-phosphate, 28% for α-d-galactose 1-phosphate, 0% for α-d-galactosamine 1-phosphate, 100% for α-d-xylose 1-phosphate, 100% for α-d-glucosamine 1-phosphate, 70% for α-d-mannose 1-phosphate, and 0% for α-d-galacturonic acid 1-phosphate. To explain our results we obtained the crystal structure of EaGalU and augmented our study by docking the different sugar 1-phosphates into EaGalU active site, providing both reliable models for substrate binding and enzyme specificity, and a rationale that explains the different activity of EaGalU on the sugar 1-phosphates used. These data demonstrate EaGalU potential as a biocatalyst for biotechnological purposes, as an alternative to the enzyme from Escherichia coli, besides playing an important role in E. amylovora pathogenicity.

Keywords: Amylovoran; Biotechnology; Erwinia amylovora; GalU; Molecular docking; UDP-glucose pyrophosphorylase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylglucosamine / analogs & derivatives
  • Acetylglucosamine / chemistry
  • Acetylglucosamine / metabolism
  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Crystallography, X-Ray
  • Erwinia amylovora / chemistry
  • Erwinia amylovora / enzymology*
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Galactosamine / analogs & derivatives
  • Galactosamine / chemistry
  • Galactosamine / metabolism
  • Galactosephosphates / chemistry
  • Galactosephosphates / metabolism
  • Gene Expression
  • Glucosamine / analogs & derivatives
  • Glucosamine / chemistry
  • Glucosamine / metabolism
  • Glucosephosphates / chemistry*
  • Glucosephosphates / metabolism
  • Kinetics
  • Mannosephosphates / chemistry
  • Mannosephosphates / metabolism
  • Models, Molecular
  • Molecular Docking Simulation
  • Pentosephosphates / chemistry
  • Pentosephosphates / metabolism
  • Polysaccharides, Bacterial / biosynthesis
  • Polysaccharides, Bacterial / chemistry
  • Protein Interaction Domains and Motifs
  • Protein Structure, Secondary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Substrate Specificity
  • UTP-Glucose-1-Phosphate Uridylyltransferase / chemistry*
  • UTP-Glucose-1-Phosphate Uridylyltransferase / genetics
  • UTP-Glucose-1-Phosphate Uridylyltransferase / metabolism
  • Uridine Diphosphate Glucose / chemistry*
  • Uridine Diphosphate Glucose / metabolism
  • Uridine Triphosphate / chemistry*
  • Uridine Triphosphate / metabolism

Substances

  • Bacterial Proteins
  • Galactosephosphates
  • Glucosephosphates
  • Mannosephosphates
  • Pentosephosphates
  • Polysaccharides, Bacterial
  • Recombinant Proteins
  • amylovoran
  • xylose 1-phosphate
  • glucosamine 1-phosphate
  • galactose-1-phosphate
  • galactosamine 1-phosphate
  • mannose 1-phosphate
  • N-acetylglucosamine-1-phosphate
  • Galactosamine
  • glucose-1-phosphate
  • UTP-Glucose-1-Phosphate Uridylyltransferase
  • Glucosamine
  • Uridine Triphosphate
  • Uridine Diphosphate Glucose
  • Acetylglucosamine