Ligand efficiency metrics in drug discovery: the pros and cons from a practical perspective

Expert Opin Drug Discov. 2017 Nov;12(11):1087-1104. doi: 10.1080/17460441.2017.1365056. Epub 2017 Aug 17.

Abstract

Ligand efficiency metrics are almost universally accepted as a valuable indicator of compound quality and an aid to reduce attrition. Areas covered: In this review, the authors describe ligand efficiency metrics giving a balanced overview on their merits and points of weakness in order to enable the readers to gain an informed opinion. Relevant theoretical breakthroughs and drug-like properties are also illustrated. Several recent exemplary case studies are discussed in order to illustrate the main fields of application of ligand efficiency metrics. Expert opinion: As a medicinal chemist guide, ligand efficiency metrics perform in a context- and chemotype-dependent manner; thus, they should not be used as a magic box. Since the 'big bang' of efficiency metrics occurred more or less ten years ago and the average time to develop a new drug is over the same period, the next few years will give a clearer outlook on the increased rate of success, if any, gained by means of these new intriguing tools.

Keywords: Drug design; docking; drug development; fragment-based drug discovery; free energy of binding; structure activity relationships.

Publication types

  • Review

MeSH terms

  • Animals
  • Chemistry, Pharmaceutical / methods*
  • Drug Design*
  • Drug Discovery / methods*
  • Humans
  • Ligands
  • Pharmaceutical Preparations / chemistry
  • Time Factors

Substances

  • Ligands
  • Pharmaceutical Preparations