Identification of the actual coding region for polyamine oxidase 6 from rice (OsPAO6) and its partial characterization

Plant Signal Behav. 2017 Aug 3;12(8):e1359456. doi: 10.1080/15592324.2017.1359456. Epub 2017 Aug 8.

Abstract

Polyamines (PA) in plant play roles in growth and development and in responses to environmental stresses. The family of polyamine oxidases (PAO) contributes to a balanced homeostasis of PAs catalyzing two different reactions, terminal catabolic (TC) and back-conversion (BC) pathway, in PA catabolism. From the seven PAOs encoded by the rice genome (OsPAO1 - OsPAO7) OsPAO6 could so far not be characterized due to failure in obtaining the coding cDNA based on accessions in the genomic databases. We report cloning and characterization of the correct OsPAO6 cDNA with a length of 1,742 bp. The 1,491 bp long open reading frame codes for a 497-amino acid protein from nine exons. The protein which has 92% identity to OsPAO7 localizes to plasma membrane.

Keywords: Oryza sativa; Polyamines; cDNA; catabolism; coding region; polyamine oxidase; rice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cloning, Molecular
  • DNA, Complementary / genetics
  • Gene Expression Regulation, Plant
  • Genome, Plant
  • Open Reading Frames / genetics*
  • Oryza / enzymology*
  • Oxidoreductases Acting on CH-NH Group Donors / genetics*
  • Oxidoreductases Acting on CH-NH Group Donors / metabolism*
  • Plant Cells / enzymology
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Polyamine Oxidase
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Subcellular Fractions / metabolism

Substances

  • DNA, Complementary
  • Plant Proteins
  • RNA, Messenger
  • Oxidoreductases Acting on CH-NH Group Donors