In silico molecular docking studies of new potential 4-phthalazinyl-hydrazones on selected Trypanosoma cruzi and Leishmania enzyme targets

J Mol Graph Model. 2017 Sep:76:313-329. doi: 10.1016/j.jmgm.2017.07.013. Epub 2017 Jul 19.

Abstract

Recently, a series of 4-phthalazinyl-hydrazones under its E-configuration have exhibited excellent in vitro antichagasic and antileishmanial profiles. Preliminary assays on both parasites suggested that the most active derivatives act through oxidative and nitrosative stress mechanisms; however, their exact mode of actions as anti-trypanosomal and anti-leishmanial agents have not been completely elucidated. This motivated to perform a molecular docking study on essential trypanosomatid enzymes such as superoxide dismutase (SOD), trypanothione reductase (TryR), cysteine-protease (CP) and pteridine reductase 1 (PTR1). In addition, to understand the experimental results of nitric oxide production obtained for infected macrophages with Leishmania parasite, a molecular docking was evaluated on nitric oxide synthase (iNOS) enzyme of Rattus norvegicus. Both diastereomers (E and Z) of the 4-phthalazinyl-hydrazones were docked on the mentioned targets. In general, molecular docking on T. cruzi enzymes revealed that the E-diastereomers exhibited lower binding energies than Z-diastereomers on the Fe-SOD and CP enzymes, while Z-diastereomers showed lower docking energies than E-isomers on TryR enzyme. For the Leishmania docking studies, the Z-isomers exhibited the best binding affinities on the PTR1 and iNOS enzymes, while the TryR enzyme showed a minor dependence with the stereoselectivity of the tested phthalazines. However, either the structural information of the ligand-enzyme complexes or the experimental data suggest that the significant antitrypanosomatid activity of the most active derivatives is not associated to the inhibition of the SOD, CP and PTR1 enzymes, while the TryR inhibition and nitric oxide generation in host cells emerge as interesting antitrypanosomatid therapeutic targets.

Keywords: Antichagasic activity; Antileishmanial activity; Leishmania; Molecular docking; Phthalazines; Trypanosoma cruzi.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antiprotozoal Agents / chemistry*
  • Antiprotozoal Agents / pharmacology
  • Enzyme Inhibitors / chemistry*
  • Enzyme Inhibitors / pharmacology
  • Enzymes / chemistry*
  • Hydrazones / chemistry*
  • Hydrazones / pharmacology
  • Hydrogen Bonding
  • Hydrophobic and Hydrophilic Interactions
  • Leishmania / enzymology
  • Molecular Conformation*
  • Molecular Docking Simulation*
  • Molecular Dynamics Simulation*
  • NADH, NADPH Oxidoreductases / chemistry
  • Structure-Activity Relationship
  • Trypanosoma cruzi / enzymology

Substances

  • Antiprotozoal Agents
  • Enzyme Inhibitors
  • Enzymes
  • Hydrazones
  • NADH, NADPH Oxidoreductases
  • trypanothione reductase