Secondary Structure Determination by Means of ATR-FTIR Spectroscopy

Methods Mol Biol. 2017:1635:195-203. doi: 10.1007/978-1-4939-7151-0_10.

Abstract

Specialized infrared spectroscopic techniques have been developed that allow studying the secondary structure of membrane proteins and the influence of crucial parameters like lipid content and detergent. Here, we focus on an ATR-FTIR spectroscopic study of Af-Amt1 and the influence of LDAO/glycerol on its structural integrity. Our results clearly indicate that infrared spectroscopy can be used to identify the adapted sample conditions.

Keywords: Ammonium transport; Infrared spectroscopy; Protein-detergent interaction; Secondary structure analysis.

MeSH terms

  • Archaeal Proteins / chemistry
  • Archaeoglobus / chemistry
  • Archaeoglobus / metabolism*
  • Detergents / chemistry
  • Membrane Proteins / chemistry*
  • Models, Molecular
  • Protein Structure, Secondary
  • Spectroscopy, Fourier Transform Infrared / methods*

Substances

  • Archaeal Proteins
  • Detergents
  • Membrane Proteins