A putative hepatitis B virus splice variant associated with chronic hepatitis and liver cirrhosis

Virology. 2017 Oct:510:224-233. doi: 10.1016/j.virol.2017.07.025. Epub 2017 Jul 24.

Abstract

Hepatitis B virus (HBV) pre-S deletion was associated with chronic hepatitis (CH) and liver cirrhosis (LC); however, the type of pre-S deletion associated with these conditions and the mechanism of the generation of pre-S deletion remain unknown. Here, pre-S sequences from asymptomatic carriers (ASCs) and carriers with CH or LC were analyzed. The results indicated that deletion in the S promoter and the C-terminal half of the pre-S1 region was more frequent in CH and LC patients than in ASCs. RNA splicing analysis revealed that one type of pre-S1 deletion mutant, termed spPS1, was derived from splicing. This variant was associated with CH (12.7% vs. 1.8%, P = 0.06) and LC (14.5% vs. 1.8%, P = 0.032) when compared with ASC. In conclusion, spPS1, a putative splice variant; S promoter deletion mutant; and deletion in the C-terminal half of the pre-S1 region were closely associated with CH and LC development.

Keywords: Chronic hepatitis; HBV; Liver cirrhosis; Pre-S deletion; Splice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carrier State / virology
  • Hepatitis B Surface Antigens / genetics*
  • Hepatitis B virus / genetics*
  • Hepatitis B virus / isolation & purification*
  • Hepatitis B, Chronic / complications*
  • Hepatitis B, Chronic / virology*
  • Humans
  • Liver Cirrhosis / virology*
  • Promoter Regions, Genetic*
  • Protein Precursors / genetics*
  • RNA Splicing
  • Sequence Analysis, DNA
  • Sequence Deletion

Substances

  • Hepatitis B Surface Antigens
  • Protein Precursors
  • presurface protein 1, hepatitis B surface antigen