Allosteric auto-inhibition and activation of the Nedd4 family E3 ligase Itch

EMBO Rep. 2017 Sep;18(9):1618-1630. doi: 10.15252/embr.201744454. Epub 2017 Jul 26.

Abstract

The Nedd4 family E3 ligases are key regulators of cell growth and proliferation and are often misregulated in human cancers and other diseases. The ligase activities of Nedd4 E3s are tightly controlled via auto-inhibition. However, the molecular mechanism underlying Nedd4 E3 auto-inhibition and activation is poorly understood. Here, we show that the WW domains proceeding the catalytic HECT domain play an inhibitory role by binding directly to HECT in the Nedd4 E3 family member Itch. Our structural and biochemical analyses of Itch reveal that the WW2 domain and a following linker allosterically lock HECT in an inactive state inhibiting E2-E3 transthiolation. Binding of the Ndfip1 adaptor or JNK1-mediated phosphorylation relieves the auto-inhibition of Itch in a WW2-dependent manner. Aberrant activation of Itch leads to migration defects of cortical neurons during development. Our study provides a new mechanism governing the regulation of Itch.

Keywords: Itch; Ndfip1; Nedd4 family E3 ligases; allosteric regulation; crystal structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allosteric Regulation
  • Animals
  • Crystallography, X-Ray
  • Endosomal Sorting Complexes Required for Transport / metabolism
  • Humans
  • Mice
  • Nedd4 Ubiquitin Protein Ligases / chemistry*
  • Nedd4 Ubiquitin Protein Ligases / genetics
  • Nedd4 Ubiquitin Protein Ligases / metabolism*
  • Phosphorylation
  • Protein Binding
  • Protein Structure, Tertiary
  • Proteolysis
  • Ubiquitin-Protein Ligases / antagonists & inhibitors
  • Ubiquitin-Protein Ligases / chemistry*
  • Ubiquitin-Protein Ligases / genetics
  • Ubiquitin-Protein Ligases / metabolism*
  • Ubiquitination
  • WW Domains

Substances

  • Endosomal Sorting Complexes Required for Transport
  • Itch protein, mouse
  • Nedd4 Ubiquitin Protein Ligases
  • Ubiquitin-Protein Ligases