Oecomys catherinae (Sigmodontinae, Cricetidae): Evidence for chromosomal speciation?

PLoS One. 2017 Jul 20;12(7):e0181434. doi: 10.1371/journal.pone.0181434. eCollection 2017.

Abstract

Among the Oryzomyini (Sigmodontinae), Oecomys is the most speciose, with 17 species. This genus presents high karyotypic diversity (2n = 54 to 2n = 86) and many taxonomic issues at the species level because of the presence of cryptic species and the overlap of morphological characters. For these reasons the real number of species of Oecomys may be underestimated. With the aim of verifying if the taxon Oecomys catherinae is composed of more than one species, we made comparative studies on two populations from two regions of Brazil, one from the Amazon and another from the Atlantic Forest using both classical cytogenetics (G- and C-banding) and comparative genomic mapping with whole chromosome probes of Hylaeamys megacephalus (HME), molecular data (cytochrome b mitochondrial DNA) and morphology. Our results confirm that Oecomys catherinae occurs in the southeast Amazon, and reveal a new karyotype for the species (2n = 62, FNa = 62). The comparative genomic analysis with HME probes identified chromosomal homeologies between both populations and rearrangements that are responsible for the different karyotypes. We compared our results in Sigmodontinae genera with other studies that also used HME probes. These chromosomal differences together with the absence of consistent differentiation between the two populations on morphological and molecular analyses suggest that these populations may represent cryptic species.

Publication types

  • Comparative Study

MeSH terms

  • Animals
  • Arvicolinae / anatomy & histology
  • Arvicolinae / genetics*
  • Brazil
  • Chromosome Painting
  • Chromosomes, Mammalian
  • Female
  • In Situ Hybridization, Fluorescence
  • Karyotype
  • Karyotyping
  • Male
  • Phylogeny
  • Sigmodontinae / anatomy & histology
  • Sigmodontinae / genetics*
  • Species Specificity

Grants and funding

This work was funded by the Conselho Nacional de Desenvolvimento Científico e Tecnológico (Productivity Grants 308428/2013-7 to CYN and 308401/2013-1 to JCP; www.cnpq.br), Fundação Amazônia Paraense (http://www.fapespa.pa.gov.br/), Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Edital BIONORTE-CNPq, Proc. 552032/2010-7; BIONORTE-FAPESPA, ICAAF 007/2011; Edital 047/2012 PRÓ-AMAZÔNIA: Biodiversidade e Sustentabilidade; www.capes.gov.br) on projects coordinated by CYN, the FAPESPA (Edital Vale – Proc. 2010/110447), BNDES (Operacão 2.318.697.0001) on projects coordinated by JCP, and Fundação de Amparo à Pesquisa do Estado de Mato Grosso (http://www.fapemat.mt.gov.br/) on a project coordinated by RVR (Proc. 477017/2011). LG thanks UERJ/Prociência and CNPq. SMM is recipient of a CAPES Doctor Scholarship in Neuroscience and Cell Biology, ALP is recipient of a CAPES Doctor Scholarship in Genetics and Molecular Biology, and VFS is recipient of a FAPEMAT Doctor Scholarship in Bionorte. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.