Screening and transcriptomic analysis of Crypthecodinium cohnii mutants with high growth and lipid content using the acetyl-CoA carboxylase inhibitor sethoxydim

Appl Microbiol Biotechnol. 2017 Aug;101(15):6179-6191. doi: 10.1007/s00253-017-8397-z. Epub 2017 Jul 3.

Abstract

The heterotrophic microalga Crypthecodinium cohnii is well known for its lipid accumulation, with a high proportion of docosahexaenoic acid (DHA). In this study, we report a novel screening approach to obtain mutants of C. cohnii with high growth and lipid content using the acetyl-CoA carboxylase (ACCase) inhibitor sethoxydim. C. cohnii mutants were generated using atmospheric and room-temperature plasma (ARTP) and then screened for two rounds in media supplemented with sethoxydim. These efforts led to the identification of mutant M-1-2, which had 24.32% higher growth and 7.05% higher lipid content than the wild type, demonstrating the effectiveness of the sethoxydim-based screening. Consistently, the M-1-2 mutant displayed a 16.15% increase in ACCase enzymatic activity and 1.53-fold upregulation of its ACCase-encoding gene based on comparative ACCase activity analysis and transcriptomic analysis, respectively. In addition, transcriptomic analysis showed that transcripts involved in fatty acid biosynthesis, energy, central carbohydrate, and amino acid metabolism were upregulated in the mutant compared to the wild type.

Keywords: ARTP; C. cohnii; Screening; Sethoxydim; Transcriptome.

MeSH terms

  • Acetyl-CoA Carboxylase / antagonists & inhibitors
  • Acetyl-CoA Carboxylase / metabolism*
  • Cyclohexanones / pharmacology
  • Dinoflagellida / chemistry*
  • Dinoflagellida / enzymology
  • Dinoflagellida / genetics
  • Dinoflagellida / growth & development*
  • Energy Metabolism / genetics
  • Fatty Acids / biosynthesis
  • Gene Expression Profiling*
  • High-Throughput Screening Assays / methods
  • Lipid Metabolism / genetics
  • Lipids / analysis*
  • Mutation*

Substances

  • Cyclohexanones
  • Fatty Acids
  • Lipids
  • sethoxydim
  • Acetyl-CoA Carboxylase