Combined Chemoinformatics Approach to Solvent Library Design Using clusterSim and Multidimensional Scaling

J Chem Inf Model. 2017 Aug 28;57(8):1807-1815. doi: 10.1021/acs.jcim.7b00038. Epub 2017 Jul 26.

Abstract

Reported here is a rational approach for the selection of solvents intended for use in physical form screening based on a novel chemoinformatics analysis of solvent properties. A comprehensive assessment of eight clustering methods was carried out on a series of 94 solvents described by calculated molecular descriptors using the clusterSim package in R. The effectiveness of clustering methods was evaluated using a range of statistical measures as well as increasing efficiency of solid form discovery using a cluster-based solvent selection approach. Multidimensional scaling was used to illustrate cluster analysis on a two-dimensional solvent map. The map presented here is a valuable tool to aid efficient solvent selection in physical form screens. This tool is equally applicable to any scientific area which requires a solubility dependent decision on solvent choice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Informatics / methods*
  • Models, Molecular
  • Molecular Conformation
  • Small Molecule Libraries / chemistry*
  • Solvents / chemistry*

Substances

  • Small Molecule Libraries
  • Solvents