Insights from Systems Biology in Physiological Studies: Learning from Context

Cell Physiol Biochem. 2017;42(3):939-951. doi: 10.1159/000478648. Epub 2017 Jun 26.

Abstract

Systems biology presents an integrated view of biological systems, focusing on the relations between elements, whether functional or evolutionary, and providing a rich framework for the comprehension of life. At the same time, many low-throughput experimental studies are performed without influence from this integrated view, whilst high-throughput experiments use low-throughput results in their validation and interpretation. We propose an inversion in this logic, and ask which benefits could be obtained from a holistic view coming from high-throughput studies-and systems biology in particular-in interpreting and designing low-throughput experiments. By exploring some key examples from the renal and adrenal physiology, we try to show that network and modularity theory, along with observed patterns of association between elements in a biological system, can have profound effects on our ability to draw meaningful conclusions from experiments.

Keywords: Context; Epistasis; Interolog; Modularity; Physiology; Systems biology; Top-down.

Publication types

  • Review

MeSH terms

  • Adrenal Glands / physiology
  • Animals
  • Gene Regulatory Networks
  • High-Throughput Screening Assays / methods*
  • Humans
  • Kidney / physiology
  • Protein Interaction Maps
  • Systems Biology / methods*