QPY/RAH haplotypes of the GZMB gene are associated with natural killer cell cytotoxicity

Immunogenetics. 2018 Jan;70(1):29-36. doi: 10.1007/s00251-017-1014-6. Epub 2017 Jun 26.

Abstract

Granzyme B (GzmB) is a component of cytolytic granules within NK cells and is involved in several pathologies. It has previously been reported that there are three non-synonymous coding SNPs (rs8192917; Q48R, rs11539752; P88A, and rs2236338; Y245H) in the GZMB gene and that the QPY/RAH allele was clustered together close to the C-terminal α-helix. However, it is unknown whether the function of GzmB produced from NK cells is influenced by QPY/RAH polymorphism. The authors investigated the distribution of QPY/RAH polymorphism of the GZMB gene in a Japanese population (n = 106), and the involvement of Q48R polymorphism in NK cell cytotoxicity, degranulation, and production of GzmB. A strong linkage disequilibrium was observed among these SNPs, and NK cell cytotoxicity was influenced by rs8192917 (Q48R). Moreover, it found that R48-GzmB is a stable protein that accumulates to similar levels in activated NK cells as Q48-GzmB. rs8192917 polymorphism may influence antitumor activity and the effect of antitumor cellular immunotherapy. The authors expect that these new informations about QPY/RAH polymorphism of the GZMB gene could help to assess the impact of NK cell cytotoxicity in several pathologies and aid their treatment.

Keywords: Cytotoxicity; Granzyme B; Natural killer cells; QPY/RAH polymorphism; rs8192917.

MeSH terms

  • Adolescent
  • Adult
  • Alleles
  • Asian People / genetics
  • Cytotoxicity, Immunologic / genetics
  • Female
  • Gene Frequency
  • Genotype
  • Granzymes / genetics*
  • Granzymes / immunology
  • Granzymes / metabolism
  • Haplotypes
  • Humans
  • Killer Cells, Natural / cytology
  • Killer Cells, Natural / immunology*
  • Linkage Disequilibrium
  • Male
  • Polymorphism, Single Nucleotide

Substances

  • GZMB protein, human
  • Granzymes