Characterization of Mediator Complex and its Associated Proteins from Rice

Methods Mol Biol. 2017:1629:123-140. doi: 10.1007/978-1-4939-7125-1_9.

Abstract

The Mediator complex is a multi-protein complex that acts as a molecular bridge conveying transcriptional messages from the cis element-bound transcription factor to the RNA Polymerase II machinery. It is found in all eukaryotes including members of the plant kingdom. Increasing number of reports from plants regarding different Mediator subunits involved in a multitude of processes spanning from plant development to environmental interactions have firmly established it as a central hub of plant regulatory networks. Routine isolation of Mediator complex in a particular species is a necessity because of many reasons. First, composition of the Mediator complex varies from species to species. Second, the composition of the Mediator complex in a particular species is not static under all developmental and environmental conditions. Besides this, at times, Mediator complex is used in in vitro transcription systems. Rice, a staple food crop of the world, is used as a model monocot crop. Realizing the need of a reliable protocol for the isolation of Mediator complex from plants, we describe here the isolation of Mediator complex from rice.

Keywords: Cofactor; Mediator complex; Mediator subunit; RNA Polymerase II; Rice; Signaling; Transcription.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Gene Expression Regulation, Plant
  • Immunoprecipitation
  • Mass Spectrometry
  • Mediator Complex / isolation & purification*
  • Mediator Complex / metabolism*
  • Oryza / genetics
  • Oryza / metabolism*
  • Plant Proteins / isolation & purification*
  • Plant Proteins / metabolism*
  • Protein Binding
  • Protein Subunits
  • RNA Polymerase II / metabolism
  • Signal Transduction
  • Transcription, Genetic
  • Workflow

Substances

  • Mediator Complex
  • Plant Proteins
  • Protein Subunits
  • RNA Polymerase II