First-Principles Interaction Analysis Assessment of the Manganese Cation in the Catalytic Activity of Glycosyltransferases

J Phys Chem B. 2017 Jun 29;121(25):6148-6162. doi: 10.1021/acs.jpcb.7b03714. Epub 2017 Jun 15.

Abstract

The energetic effect of water substitution reactions in hexacoordinated [Mn(H2O)6-nLzn]2+nz complexes with L = methanol, formic acid, formamide, formate, imidazole, and diphosphate is quantitatively analyzed at the MP2/triple-ζ level of theory. Subsequently, the state-of-the-art open shell symmetry-adapted perturbation theory (SAPT) analysis of the interaction energies of Mn2+···ligand dimers with selected O-, S-, and N-binding ligands is presented and compared to similar interactions of Mg2+ and Zn2+ ions. We find that the induction energies in the dimers with manganese are almost twice as large as in dimers with magnesium. The total interaction energies rise in the order Mn2+ < Mg2+ < Zn2+. The calculations of the Mn2+ → Mg2+ replacement reaction suggest that metal-dependent glycosyltransferases influence the binding preference of Mn2+ over Mg2+ by inserting amino acids that coordinate the metal via nitrogen or sulfur into their active site.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biocatalysis*
  • Cations / chemistry
  • Cations / metabolism
  • Glycosyltransferases / chemistry*
  • Glycosyltransferases / metabolism*
  • Manganese / chemistry
  • Manganese / metabolism*
  • Quantum Theory

Substances

  • Cations
  • Manganese
  • Glycosyltransferases