FisR activates σ54 -dependent transcription of sulfide-oxidizing genes in Cupriavidus pinatubonensis JMP134

Mol Microbiol. 2017 Aug;105(3):373-384. doi: 10.1111/mmi.13725. Epub 2017 Jun 29.

Abstract

Some heterotrophic bacteria are able to oxidize sulfide (H2 S, HS- and S2- ) to sulfite and thiosulfate via polysulfide. The genes coding for the oxidation enzymes in Cupriavidus pinatubonensis JMP134 have recently been identified; however, their regulation is unknown. A regulator gene is adjacent to the operon of the sulfide-oxidizing genes, encoding a σ54 -dependent transcription factor (FisR) with three domains: an R domain, an AAA+ domain and a DNA-binding domain. Here it is reported that the regulator responds to the presence of sulfide and activates the sulfide-oxidizing genes. FisR binds to its cognate operator at -114 to -135 bp of the transcription start of the operon. When polysulfide reacts with the R domain of FisR through the three conserved cysteine residues (C53, C64 and C71), FisR activates the expression of the operon. FisR is highly sensitive to polysulfide, activating σ54 -dependent transcription of sulfide-oxidizing genes for sulfide removal. Further, sequence analysis indicates that FisR-type regulators are relatively common for controlling sulfide-oxidizing genes under sulfide stress in the Proteobacteria.

MeSH terms

  • Amino Acid Sequence
  • Conserved Sequence
  • Cupriavidus / genetics*
  • Cupriavidus / metabolism
  • Cysteine
  • Gene Expression Regulation, Bacterial / genetics
  • Genes, Regulator
  • Operon
  • Oxidation-Reduction
  • Sulfides / metabolism
  • Sulfur / metabolism*
  • Thiosulfates / metabolism
  • Transcription Factors / genetics
  • Transcription Factors / metabolism

Substances

  • Sulfides
  • Thiosulfates
  • Transcription Factors
  • Sulfur
  • polysulfide
  • Cysteine