Multiplication of Ribosomal P-Stalk Proteins Contributes to the Fidelity of Translation

Mol Cell Biol. 2017 Aug 11;37(17):e00060-17. doi: 10.1128/MCB.00060-17. Print 2017 Sep 1.

Abstract

The P-stalk represents a vital element within the ribosomal GTPase-associated center, which represents a landing platform for translational GTPases. The eukaryotic P-stalk exists as a uL10-(P1-P2)2 pentameric complex, which contains five identical C-terminal domains, one within each protein, and the presence of only one such element is sufficient to stimulate factor-dependent GTP hydrolysis in vitro and to sustain cell viability. The functional contribution of the P-stalk to the performance of the translational machinery in vivo, especially the role of P-protein multiplication, has never been explored. Here, we show that ribosomes depleted of P1/P2 proteins exhibit reduced translation fidelity at elongation and termination steps. The elevated rate of the decoding error is inversely correlated with the number of the P-proteins present on the ribosome. Unexpectedly, the lack of P1/P2 has little effect in vivo on the efficiency of other translational GTPase (trGTPase)-dependent steps of protein synthesis, including translocation. We have shown that loss of accuracy of decoding caused by P1/P2 depletion is the major cause of translation slowdown, which in turn affects the metabolic fitness of the yeast cell. We postulate that the multiplication of P-proteins is functionally coupled with the qualitative aspect of ribosome action, i.e., the recoding phenomenon shaping the cellular proteome.

Keywords: ribosomal proteins; ribosomal stalk; ribosome.

MeSH terms

  • GTP Phosphohydrolases / metabolism
  • Phosphoproteins / metabolism
  • Polyribosomes / metabolism*
  • Protein Structure, Tertiary / physiology
  • Proteome / metabolism
  • Ribosomal Proteins / chemistry
  • Ribosomal Proteins / metabolism*
  • Ribosomes / metabolism*
  • Saccharomyces cerevisiae / metabolism*

Substances

  • Phosphoproteins
  • Proteome
  • Ribosomal Proteins
  • GTP Phosphohydrolases