Measuring and Modeling Highly Accurate 15 N Chemical Shift Tensors in a Peptide

Chemphyschem. 2017 Aug 18;18(16):2225-2232. doi: 10.1002/cphc.201700357. Epub 2017 Jun 20.

Abstract

NMR studies measuring chemical shift tensors are increasingly being employed to assign structure in difficult-to-crystallize solids. For small organic molecules, such studies usually focus on 13 C sites, but proteins and peptides are more commonly described using 15 N amide sites. An important and often neglected consideration when measuring shift tensors is the evaluation of their accuracy against benchmark standards, where available. Here we measure 15 N tensors in the dipeptide glycylglycine at natural abundance using the slow-spinning FIREMAT method with SPINAL-64 decoupling. The accuracy of these 15 N tensors is evaluated by comparing to benchmark single crystal NMR 15 N measurements and found to be statistically indistinguishable. These FIREMAT experimental results are further used to evaluate the accuracy of theoretical predictions of tensors from four different density functional theory (DFT) methods that include lattice effects. The best theoretical approach provides a root mean square (rms) difference of ±3.9 ppm and is obtained from a fragment-based method and the PBE0 density functional.

Keywords: 15N; DFT; chemical shift tensor; peptide; solid-state NMR.

MeSH terms

  • Models, Molecular
  • Nuclear Magnetic Resonance, Biomolecular*
  • Peptides / chemistry*
  • Protein Conformation
  • Quantum Theory

Substances

  • Peptides