Enhanced expression of lipase I from Galactomyces geotrichum by codon optimisation in Pichia pastoris

Protein Expr Purif. 2017 Oct:138:34-45. doi: 10.1016/j.pep.2017.05.005. Epub 2017 Jun 3.

Abstract

Relatively poor heterologous protein yields have limited the commerical applications of Galactomyces geotrichum lipase I (GGl I) efficacy trials. To address this, we have redesigned the GGl I gene to preferentially match codon frequencies of Pichia pastoris (P. pastoris) while retaining the same amino acid sequence. The wild type and codon optimised GGl I (GGl I-wt and GGl I-op) were synthesised and cloned into pPICZαA with an N-terminal 6 × His tag sequence and expressed in P. pastoris X 33. The hydrolytic activity of GGl I-op was 150 U/mL, whereas the activity of the GGl I-wt could not be detected. GGl I-op recombinant proteins were purified by Ni-affinity chromatography and then characterised. The identity and purity of GGl I were confirmed by SDS-PAGE, MALDI-TOF mass spectrometry and Western blot analysis. Enzymatic deglycosylation was used to show that the lipase is a glycosylated protein, containing ∼10% sugar. The molecular weight (MW) of the GGl I secreted by recombinant P. pastoris was approximated at 63 kDa. The optimum pH and temperature of the recombinant lipase were 8.0 and 35 °C, respectively. The enzyme was active over a broad pH range (7.0-9.0) and temperature range (20 °C-45 °C). The lipase showed high activity toward medium- and long-chain fatty acid methyl esters (C8-C16) and retained much of its activity in the presence of Tween-80 and Trition X-100. Lipase activity was stimulated by Mg2+, Ca2+, Mn2+ and Cu2+ and inhibited by Fe2+, Fe3+, Zn2+ and Co2+. This lipase may prove useful to the detergent industry and in organic synthesis reactions.

Keywords: Characterisation; Codon optimisation; Galactomyces geotrichum lipase I; Gene cloning; Over-expression.

MeSH terms

  • Amino Acid Sequence
  • Cations, Divalent
  • Chromatography, Affinity
  • Cloning, Molecular
  • Codon / chemistry
  • Codon / metabolism*
  • Enzyme Assays
  • Esters
  • Fatty Acids / metabolism*
  • Fungal Proteins / genetics
  • Fungal Proteins / isolation & purification
  • Fungal Proteins / metabolism*
  • Gene Expression
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism
  • Histidine / genetics
  • Histidine / isolation & purification
  • Histidine / metabolism
  • Hydrogen-Ion Concentration
  • Kinetics
  • Lipase / genetics
  • Lipase / isolation & purification
  • Lipase / metabolism*
  • Metals / metabolism
  • Molecular Weight
  • Oligopeptides / genetics
  • Oligopeptides / isolation & purification
  • Oligopeptides / metabolism
  • Pichia / genetics*
  • Pichia / metabolism
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / isolation & purification
  • Recombinant Fusion Proteins / metabolism*
  • Saccharomycetales / chemistry*
  • Saccharomycetales / enzymology
  • Sequence Alignment
  • Substrate Specificity
  • Temperature

Substances

  • Cations, Divalent
  • Codon
  • Esters
  • Fatty Acids
  • Fungal Proteins
  • His-His-His-His-His-His
  • Metals
  • Oligopeptides
  • Recombinant Fusion Proteins
  • Histidine
  • Lipase