Environmental yeast communities in vineyards in the mountains of Santa Catarina State, Brazil

World J Microbiol Biotechnol. 2017 Jun;33(6):128. doi: 10.1007/s11274-017-2298-2. Epub 2017 May 26.

Abstract

Yeasts were isolated from three vineyards located in the South Region of Brazil. A cross evaluation was carried out at the oldest vineyard of the study in Pinheiro Preto. Samples of grape berries, grapevine leaves and the soil, along with samples of the winery equipment and effluent, were collected. In the Serra do Marari and Campos Novos vineyards only samples of grape clusters were obtained. The 106 yeast isolates were identified by sequencing the D1/D2 domain of LSU rDNA or ITS1-5.8S-ITS2 region in 22 species. The values for the richness indices varied between the vineyards. A comparison of the taxonomic diversity of the yeasts from these regions using the reciprocal Simpson index showed a significant difference between the Serra do Marari and Campos Novos vineyards (5.72 ± 0.36 and 2.92 ± 0.36, respectively, p < 0.0001). The functional diversity was assessed in relation to the use of carbon and nitrogen sources by the yeasts isolated from each location. In general, we observed that the Pinheiro Preto and Campos Novos vineyards differed consistently from the Serra do Marari vineyard according to these indices (FAD2, FDc and Rao, p < 0.0001). The possible spreading of Saccharomyces cerevisiae from the winery to the vineyard in Pinheiro Preto was observed.

Keywords: Functional diversity; Highland vineyards; Taxonomic diversity.

MeSH terms

  • Biodiversity
  • Brazil
  • Carbon / metabolism
  • DNA, Fungal / genetics
  • DNA, Ribosomal / genetics
  • Environmental Microbiology*
  • Farms*
  • Phylogeny
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / growth & development
  • Saccharomyces cerevisiae / isolation & purification
  • Soil
  • Soil Microbiology*
  • Species Specificity
  • Yeasts / classification*
  • Yeasts / genetics
  • Yeasts / growth & development
  • Yeasts / isolation & purification*

Substances

  • DNA, Fungal
  • DNA, Ribosomal
  • Soil
  • Carbon