Fingerprints of resistant Escherichia coli O157:H7 from vegetables and environmental samples

J Sci Food Agric. 2018 Jan;98(1):80-86. doi: 10.1002/jsfa.8441. Epub 2017 Aug 9.

Abstract

Background: Some routes of transmission of Escherichia coli O157:H7 to fresh produce include contaminated irrigation water and manure polluted soils. The aim of the present study was to determine the genetic relationships of E. coli O157:H7 isolated from some produce growing region in Nigeria using enterobacterial repetitive intergenic consensus (ERIC) DNA fingerprinting analysis. A total of 440 samples comprising leafy greens, irrigation water, manure and soil were obtained from vegetable producing regions in Kano and Plateau States, Nigeria. Genes coding for the quinolone resistance-determinant (gyrA) and plasmid (pCT) coding for multidrug resistance (MDR) were determined using polymerase chain reaction (PCR) in 16 isolates that showed MDR.

Results: Cluster analysis of the ERIC-PCR profiles based on band sizes revealed six main clusters from the sixteen isolates analysed. The largest cluster (cluster 3) grouped isolates from vegetables and manure at a similarity coefficient of 0.72.

Conclusion: The present study provides data that support the potential transmission of resistant strains of E. coli O157:H7 from vegetables and environmental sources to humans with potential public health implications, especially in developing countries. © 2017 Society of Chemical Industry.

Keywords: ERIC- PCR; Escherichia coli O157:H7; irrigation water; manure; vegetables.

MeSH terms

  • Agricultural Irrigation
  • Anti-Bacterial Agents / pharmacology
  • Drug Resistance, Bacterial
  • Escherichia coli O157 / classification
  • Escherichia coli O157 / drug effects
  • Escherichia coli O157 / genetics
  • Escherichia coli O157 / isolation & purification*
  • Food Contamination / analysis*
  • Manure / microbiology
  • Nigeria
  • Plant Leaves / microbiology
  • Quinolones / pharmacology
  • Soil Microbiology*
  • Vegetables / microbiology*
  • Water Microbiology*

Substances

  • Anti-Bacterial Agents
  • Manure
  • Quinolones