AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus

Angew Chem Int Ed Engl. 2017 Aug 7;56(33):9986-9989. doi: 10.1002/anie.201701992. Epub 2017 May 16.

Abstract

Isovaleryl coenzyme A (IV-CoA) is an important precursor for iso-fatty acids and lipids. It acts in the development of myxobacteria, which can produce this compound from acetyl-CoA through alternative IV-CoA biosynthesis (aib). A central reaction of aib is catalyzed by AibA/AibB, which acts as a cofactor-free decarboxylase despite belonging to the family of CoA-transferases. We developed an efficient expression system for AibA/AibB that allowed the determination of high-resolution crystal structures in complex with different ligands. Through mutational studies, we show that an active-site cysteine previously proposed to be involved in decarboxylation is not required for activity. Instead, AibA/AibB seems to induce an intramolecular decarboxylation by binding its substrate in a hydrophobic cavity and forcing it into a bent conformation. Our study opens opportunities for synthetic biology studies, since AibA/AibB may be suitable for the production of isobutene, a precursor of biofuels and chemicals.

Keywords: biosynthesis; decarboxylation; enzymes; protein expression; structural biology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyl Coenzyme A / metabolism
  • Carboxy-Lyases / metabolism*
  • Catalytic Domain
  • Coenzyme A-Transferases / metabolism
  • Decarboxylation
  • Hemiterpenes
  • Hydrophobic and Hydrophilic Interactions
  • Ligands
  • Myxococcus xanthus / metabolism*
  • Pentanoic Acids / metabolism*

Substances

  • Acyl Coenzyme A
  • Hemiterpenes
  • Ligands
  • Pentanoic Acids
  • isovaleric acid
  • isovaleryl-coenzyme A
  • Coenzyme A-Transferases
  • Carboxy-Lyases