Spatial Bayesian latent factor regression modeling of coordinate-based meta-analysis data

Biometrics. 2018 Mar;74(1):342-353. doi: 10.1111/biom.12713. Epub 2017 May 12.

Abstract

Now over 20 years old, functional MRI (fMRI) has a large and growing literature that is best synthesised with meta-analytic tools. As most authors do not share image data, only the peak activation coordinates (foci) reported in the article are available for Coordinate-Based Meta-Analysis (CBMA). Neuroimaging meta-analysis is used to (i) identify areas of consistent activation; and (ii) build a predictive model of task type or cognitive process for new studies (reverse inference). To simultaneously address these aims, we propose a Bayesian point process hierarchical model for CBMA. We model the foci from each study as a doubly stochastic Poisson process, where the study-specific log intensity function is characterized as a linear combination of a high-dimensional basis set. A sparse representation of the intensities is guaranteed through latent factor modeling of the basis coefficients. Within our framework, it is also possible to account for the effect of study-level covariates (meta-regression), significantly expanding the capabilities of the current neuroimaging meta-analysis methods available. We apply our methodology to synthetic data and neuroimaging meta-analysis datasets.

Keywords: Bayesian modeling; Factor analysis; Functional principal component analysis; Meta-analysis; Reverse inference; Spatial point pattern data.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bayes Theorem*
  • Humans
  • Latent Class Analysis*
  • Magnetic Resonance Imaging
  • Meta-Analysis as Topic*
  • Models, Statistical*
  • Neuroimaging
  • Principal Component Analysis
  • Spatial Regression*
  • Stochastic Processes