Data on RDM16 and STA1 regulate differential usage of exon/intron in RNA directed DNA Methylation pathway

Ravi Datta Sharma; Bert Bogaerts; Neha Goyal

doi:10.1016/j.dib.2017.03.050

Data on RDM16 and STA1 regulate differential usage of exon/intron in RNA directed DNA Methylation pathway

Data Brief. 2017 Apr 8:12:261-268. doi: 10.1016/j.dib.2017.03.050. eCollection 2017 Jun.

Authors

Ravi Datta Sharma^{1

2}, Bert Bogaerts¹, Neha Goyal³

Affiliations

¹ Centre for Microbial and Plant Genetics, KU Leuven, 3000, Belgium.
² Amity institute of Biotechnology and Amity institute of Integrative Sciences and Health, Amity University Haryana, NH-8, Panchgaon, Gurgaon, Haryana 122413, India.
³ School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India.

Abstract

This article contains data on RDM16 and STA1 regulate differential usage of exon/intron in RNA directed DNA Methylation pathway (RdDM) (Sharma et al., 2016) [5]. This data include expression profiles of top 100 genes that has at least one exon or intron differentially expressed in three different contrast, i.e., WT (Wild type) vs RDM16, WT vs STA1, and RDM16 vs STA1. Also we included the alignment of MORC6 protein to the ATPase-C family members that have conserved three ATP binding sites and conserved Mg2+ binding sites in the spliced exon.

Keywords: Alternative splicing; Arabidopsis thaliana; RNA directed DNA methylation pathway; RNA-Seq.