Distinguishing Individual DNA Bases in a Network by Non-Resonant Tip-Enhanced Raman Scattering

Angew Chem Int Ed Engl. 2017 May 8;56(20):5561-5564. doi: 10.1002/anie.201702263. Epub 2017 Apr 10.

Abstract

The importance of identifying DNA bases at the single-molecule level is well recognized for many biological applications. Although such identification can be achieved by electrical measurements using special setups, it is still not possible to identify single bases in real space by optical means owing to the diffraction limit. Herein, we demonstrate the outstanding ability of scanning tunneling microscope (STM)-controlled non-resonant tip-enhanced Raman scattering (TERS) to unambiguously distinguish two individual complementary DNA bases (adenine and thymine) with a spatial resolution down to 0.9 nm. The distinct Raman fingerprints identified for the two molecules allow to differentiate in real space individual DNA bases in coupled base pairs. The demonstrated ability of non-resonant Raman scattering with super-high spatial resolution will significantly extend the applicability of TERS, opening up new routes for single-molecule DNA sequencing.

Keywords: DNA bases; molecular recognition; non-resonant Raman spectroscopy; scanning tunneling microscopy; tip-enhanced Raman scattering.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenine / chemistry*
  • Base Pairing
  • DNA / chemistry*
  • Sequence Analysis, DNA
  • Spectrum Analysis, Raman*
  • Thymine / chemistry*

Substances

  • DNA
  • Adenine
  • Thymine