Data on graphical representation (CGR and FCGR) of bacterial and archaeal species from two Soda Lakes

Bhagwan N Rekadwad; Chandrahasya N Khobragade

doi:10.1016/j.dib.2017.03.017

Data on graphical representation (CGR and FCGR) of bacterial and archaeal species from two Soda Lakes

Data Brief. 2017 Mar 16:12:72-76. doi: 10.1016/j.dib.2017.03.017. eCollection 2017 Jun.

Authors

Bhagwan N Rekadwad¹, Chandrahasya N Khobragade¹

Affiliation

¹ School of Life Sciences, Swami Ramanand Teerth Marathwada University, Nanded 431606, MS, India.

Abstract

In this paper, we presented the datasets generated using Chose Game representation (CGR) and Choase Game Representation of Frequencies (FCGR) of bacterial and archaeal 16S rRNA sequences. The data in the form of graphical representations was yielded with the help of ENDMEMO tool. The computational representation of these data datasets is useful for studies and interpretation of microbial sequences. Based on a technique from chaotic dynamics, the method produces a picture of any gene (DNA and RNA) sequence which displays both local and global patterns. Eukaryotes and prokaryotes can be identified merely based on their generated visual representation/DNA structures.

Keywords: 16S rRNA; Chilka Lake; ENDMEMO; Halophiles; Sambhar Lake.