Elucidation of Biosynthetic Pathways of Natural Products

Chem Rec. 2017 Nov;17(11):1095-1108. doi: 10.1002/tcr.201700015. Epub 2017 Apr 7.

Abstract

During the last decade, we have revealed biosynthetic pathways responsible for the formation of important and chemically complex natural products isolated from various organisms through genetic manipulation. Detailed in vivo and in vitro characterizations enabled elucidation of unexpected mechanisms of secondary metabolite biosynthesis. This personal account focuses on our recent efforts in identifying the genes responsible for the biosynthesis of spirotryprostatin, aspoquinolone, Sch 210972, pyranonigrin, fumagillin and pseurotin. We exploit heterologous reconstitution of biosynthetic pathways of interest in our study. In particular, extensive involvement of oxidation reactions is discussed. Heterologous hosts employed here are Saccharomyces cerevisiae, Aspergillus nidulans and A. niger that can also be used to prepare biosynthetic intermediates and product analogs by engineering the biosynthetic pathways using the knowledge obtained by detailed characterizations of the enzymes. (998 char.).

Keywords: biosynthesis; engineered biosynthesis; enzymatic reaction; natural product; target-guided genome mining.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biological Products / analysis
  • Biological Products / metabolism*
  • Biosynthetic Pathways*
  • Cyclohexanes / analysis
  • Cyclohexanes / metabolism
  • Fatty Acids, Unsaturated / analysis
  • Fatty Acids, Unsaturated / metabolism
  • Fungi / chemistry
  • Fungi / enzymology
  • Fungi / genetics
  • Fungi / metabolism*
  • Genes, Fungal
  • Heterocyclic Compounds, 4 or More Rings / analysis
  • Heterocyclic Compounds, 4 or More Rings / metabolism
  • Hydroxyquinolines / analysis
  • Hydroxyquinolines / metabolism
  • Models, Molecular
  • Piperazines / metabolism
  • Pyrones / analysis
  • Pyrones / metabolism
  • Pyrroles / analysis
  • Pyrroles / metabolism
  • Secondary Metabolism
  • Sesquiterpenes / analysis
  • Sesquiterpenes / metabolism
  • Spiro Compounds / metabolism

Substances

  • Biological Products
  • Cyclohexanes
  • Fatty Acids, Unsaturated
  • Heterocyclic Compounds, 4 or More Rings
  • Hydroxyquinolines
  • Piperazines
  • Pyrones
  • Pyrroles
  • Sch 210972
  • Sesquiterpenes
  • Spiro Compounds
  • pyranonigrin A
  • spirotryprostatin A
  • spirotryprostatin B
  • viridicatin
  • fumagillin