Reduced TORC1 signaling abolishes mitochondrial dysfunctions and shortened chronological lifespan of Isc1p-deficient cells

Microb Cell. 2014 Jan 6;1(1):21-36. doi: 10.15698/mic2014.01.121.

Abstract

The target of rapamycin (TOR) is an important signaling pathway on a hierarchical network of interacting pathways regulating central biological processes, such as cell growth, stress response and aging. Several lines of evidence suggest a functional link between TOR signaling and sphingolipid metabolism. Here, we report that the TORC1-Sch9p pathway is activated in cells lacking Isc1p, the yeast orthologue of mammalian neutral sphingomyelinase 2. The deletion of TOR1 or SCH9 abolishes the premature aging, oxidative stress sensitivity and mitochondrial dysfunctions displayed by isc1Δ cells and this is correlated with the suppression of the autophagic flux defect exhibited by the mutant strain. The protective effect of TOR1 deletion, as opposed to that of SCH9 deletion, is not associated with the attenuation of Hog1p hyperphosphorylation, which was previously implicated in isc1Δ phenotypes. Our data support a model in which Isc1p regulates mitochondrial function and chronological lifespan in yeast through the TORC1-Sch9p pathway although Isc1p and TORC1 also seem to act through independent pathways, as isc1Δtor1Δ phenotypes are intermediate to those displayed by isc1Δ and tor1Δ cells. We also provide evidence that TORC1 downstream effectors, the type 2A protein phosphatase Sit4p and the AGC protein kinase Sch9p, integrate nutrient and stress signals from TORC1 with ceramide signaling derived from Isc1p to regulate mitochondrial function and lifespan in yeast. Overall, our results show that TORC1-Sch9p axis is deregulated in Isc1p-deficient cells, contributing to mitochondrial dysfunction, enhanced oxidative stress sensitivity and premature aging of isc1Δ cells.

Keywords: Isc1p; ROS; Sch9p; Tor1p; ceramide; chronological aging; mitochondrial function; oxidative stress.

Grants and funding

We are grateful to Dr. David E. Levin (Goldman School of Dental Medicine, Boston University, Boston, USA), Dr. Robbie Loewith (University of Geneva, Switzerland), Dr. Francesc Posas (Universitat Pompeu Fabra, Barcelona, Spain), Dr. Yusuf Hannnun (Stony Brook University, Health Science Center, Stony Brook, New York, USA) and Dr. Paula Ludovico (ICVS, Universidade do Minho, Portugal) for generously providing plasmids and other reagents used in this study and fruitful discussion. We would like to thank Catarina Leitão (AFCU, IBMC) for technical support on flow cytometry and Paula Sampaio (ALM, IBMC) for technical assistance and data treatment on fluorescence microscopy. Funding. This work was supported by FEDER (Fundo Europeu de Desenvolvimento Regional) through the program “Programa Operacional Fatores de Competitividade-COMPETE”, by FCT (Fundação para a Ciência e Tecnologia) and by "Programa Operacional Regional do Norte (ON.2 - O Novo Norte)", through the projects PEST-C/SAU/LA0002/2013-FCOMP-01-0124-FEDER-037277 and NORTE-07-0124-FEDER-000001. V.H.F.T. (SFRH/BD/72134/2010) and R.V. (SFRH/BD/48125/2008) were supported by FCT fellowships.