Estimating gene regulatory networks with pandaR

Bioinformatics. 2017 Jul 15;33(14):2232-2234. doi: 10.1093/bioinformatics/btx139.

Authors

Daniel Schlauch^{1

2}, Joseph N Paulson^{1

2}, Albert Young^{1

2}, Kimberly Glass³, John Quackenbush^{1

2}

Affiliations

¹ Department of Computational Biology and Biostatistics, Dana-Farber Cancer Institute, Brigham and Women's Hospital, Boston, MA, USA.
² Department of Biostatistics, Harvard T.H. Chan School of Public Health, Brigham and Women's Hospital, Boston, MA, USA.
³ Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, MA, USA.

Abstract

Contact: johnq@jimmy.harvard.edu or dschlauch@fas.harvard.edu.

Availability and implementation: PandaR is provided as a Bioconductor R Package and is available at bioconductor.org/packages/pandaR.

© The Author(s) 2017. Published by Oxford University Press.

MeSH terms

Computational Biology / methods*
Gene Regulatory Networks*
Humans
Models, Biological
Protein Interaction Maps
Software*
Transcriptome

Grants and funding