MAD2L2 Promotes Open Chromatin in Embryonic Stem Cells and Derepresses the Dppa3 Locus

Stem Cell Reports. 2017 Apr 11;8(4):813-821. doi: 10.1016/j.stemcr.2017.02.011. Epub 2017 Mar 16.

Abstract

The chromatin of naive embryonic stem cells (ESCs) has a largely open configuration, as evident by the lack of condensed heterochromatin and the hypomethylation of DNA. Several molecular mechanisms promoting this constellation were previously identified. Here we present evidence for an important epigenetic function of MAD2L2, a protein originally known for its role in DNA damage repair, and for its requirement in germ cell development. We demonstrate using super-resolution microscopy that numerous MAD2L2 microfoci are exclusively associated with euchromatin, similar to other factors of the DNA damage response. In the absence of MAD2L2 the amount of heterochromatin demarcated by H3K9me2 was significantly increased. Among the most strongly suppressed genes was Dppa3, an ESC- and germ-cell-specific gene regulating DNA methylation. In Mad2l2-deficient ESCs 5-methylcytosine levels were globally increased, while several imprinted genes became hypomethylated and transcriptionally activated. Our results emphasize the important function of MAD2L2 for the open chromatin configuration of ESCs.

Keywords: DNA damage; DNA methylation; epigenetics; germ cells; heterochromatin.

MeSH terms

  • Animals
  • Cell Line
  • Chromosomal Proteins, Non-Histone
  • DNA Damage
  • DNA Methylation
  • Down-Regulation
  • Epigenesis, Genetic*
  • Euchromatin / genetics
  • Euchromatin / metabolism*
  • Gene Deletion
  • Genetic Loci
  • Heterochromatin / genetics
  • Heterochromatin / metabolism
  • Mad2 Proteins / analysis
  • Mad2 Proteins / genetics
  • Mad2 Proteins / metabolism*
  • Mice
  • Mouse Embryonic Stem Cells / cytology*
  • Mouse Embryonic Stem Cells / metabolism
  • Repressor Proteins / genetics*
  • Transcriptional Activation

Substances

  • Chromosomal Proteins, Non-Histone
  • Dppa3 protein, mouse
  • Euchromatin
  • Heterochromatin
  • Mad2 Proteins
  • Mad2l2 protein, mouse
  • Repressor Proteins