Regulation of MUC5B Expression in Idiopathic Pulmonary Fibrosis

Am J Respir Cell Mol Biol. 2017 Jul;57(1):91-99. doi: 10.1165/rcmb.2017-0046OC.

Abstract

The gain-of-function mucin 5B (MUC5B) promoter variant, rs35705950, confers the largest risk, genetic or otherwise, for the development of idiopathic pulmonary fibrosis; however, the mechanisms underlying the regulation of MUC5B expression have yet to be elucidated. Here, we identify a critical regulatory domain that contains the MUC5B promoter variant and has a highly conserved forkhead box protein A2 (FOXA2) binding motif. This region is differentially methylated in association with idiopathic pulmonary fibrosis, MUC5B expression, and rs35705950. In addition, we show that this locus binds FOXA2 dynamically, and that binding of FOXA2 is necessary for enhanced expression of MUC5B. In aggregate, our findings identify novel targets to regulate the expression of MUC5B.

Keywords: DNA methylation; gene regulation; idiopathic pulmonary fibrosis; mucin 5B; mucins.

MeSH terms

  • Base Sequence
  • Binding Sites
  • Chromatin Immunoprecipitation
  • CpG Islands / genetics
  • DNA Methylation / genetics
  • Gene Knockdown Techniques
  • Hepatocyte Nuclear Factor 3-beta / metabolism
  • Humans
  • Idiopathic Pulmonary Fibrosis / genetics*
  • Lung / metabolism
  • Lung / pathology
  • Mucin-5B / genetics*
  • Mucin-5B / metabolism
  • Polymorphism, Single Nucleotide / genetics
  • Promoter Regions, Genetic
  • Protein Binding / genetics
  • RNA Polymerase II / metabolism
  • RNA, Small Interfering / metabolism

Substances

  • FOXA2 protein, human
  • Mucin-5B
  • RNA, Small Interfering
  • Hepatocyte Nuclear Factor 3-beta
  • RNA Polymerase II