Quantitative tumor heterogeneity assessment on a nuclear population basis

Cytometry A. 2017 Jun;91(6):574-584. doi: 10.1002/cyto.a.23047. Epub 2017 Jan 31.

Abstract

Immunohistochemistry Ki-67 stain is widely used for visualizing cell proliferation. The common method for scoring the proliferation is to manually select and score a hot spot. This method is time-consuming and will often not give reproducible results due to subjective selection of the hotspots and subjective scoring. An automatic hotspot detection and proliferative index scoring would be time-saving, make the determination of the Ki-67 score easier and minimize the uncertainty of the score by introducing a more objective and standardized score. Tissue Micro Array cores stained for Ki-67 and their neighbor slide stained for Pan Cytokeratin were aligned and Ki-67 positive and negative nuclei were identified inside tumor regions. A heatmap was calculated based on these and illustrates the distribution of the heterogenous response of Ki-67 positive nuclei in the tumor tissue. An automatic hot spot detection was developed and the Ki-67 score was calculated. All scores were compared with scores provided by a pathologist using linear regression models. No significant difference was found between the Ki-67 scores guided by the developed heatmap and the scores provided by a pathologist. For comparison, scores were also calculated at a random place outside the hot spot and these scores were found to be significantly different from the pathologist scores. A heatmap visualizing the heterogeneity in tumor tissue expressed by Ki-67 was developed and used for an automatic identification of hot spots in which a Ki-67 score was calculated. The Ki-67 scores did not differ significantly from scores provided by a pathologist. © 2017 International Society for Advancement of Cytometry.

Keywords: Ki-67 antigen; breast cancer; computer-assisted image analysis; heatmap; heterogeneity; hot spot; hot spot detection.

MeSH terms

  • Algorithms
  • Biomarkers, Tumor / genetics*
  • Breast Neoplasms / diagnosis*
  • Breast Neoplasms / genetics
  • Breast Neoplasms / pathology
  • Breast Neoplasms / ultrastructure
  • Cell Nucleus / metabolism
  • Cell Nucleus / pathology
  • Cell Nucleus / ultrastructure*
  • Cell Proliferation
  • Epithelial Cells / metabolism
  • Epithelial Cells / pathology
  • Epithelial Cells / ultrastructure*
  • Female
  • Humans
  • Image Interpretation, Computer-Assisted / methods
  • Immunohistochemistry / standards
  • Keratins / genetics*
  • Ki-67 Antigen / genetics*
  • Linear Models
  • Reproducibility of Results
  • Tissue Array Analysis / standards

Substances

  • Biomarkers, Tumor
  • Ki-67 Antigen
  • Keratins