Specific Arabidopsis thaliana malic enzyme isoforms can provide anaplerotic pyruvate carboxylation function in Saccharomyces cerevisiae

FEBS J. 2017 Feb;284(4):654-665. doi: 10.1111/febs.14013. Epub 2017 Feb 1.

Abstract

NAD(P)-malic enzyme (NAD(P)-ME) catalyzes the reversible oxidative decarboxylation of malate to pyruvate, CO2 , and NAD(P)H and is present as a multigene family in Arabidopsis thaliana. The carboxylation reaction catalyzed by purified recombinant Arabidopsis NADP-ME proteins is faster than those reported for other animal or plant isoforms. In contrast, no carboxylation activity could be detected in vitro for the NAD-dependent counterparts. In order to further investigate their putative carboxylating role in vivo, Arabidopsis NAD(P)-ME isoforms, as well as the NADP-ME2del2 (with a decreased ability to carboxylate pyruvate) and NADP-ME2R115A (lacking fumarate activation) versions, were functionally expressed in the cytosol of pyruvate carboxylase-negative (Pyc- ) Saccharomyces cerevisiae strains. The heterologous expression of NADP-ME1, NADP-ME2 (and its mutant proteins), and NADP-ME3 restored the growth of Pyc- S. cerevisiae on glucose, and this capacity was dependent on the availability of CO2 . On the other hand, NADP-ME4, NAD-ME1, and NAD-ME2 could not rescue the Pyc- strains from C4 auxotrophy. NADP-ME carboxylation activity could be measured in leaf crude extracts of knockout and overexpressing Arabidopsis lines with modified levels of NADP-ME, where this activity was correlated with the amount of NADP-ME2 transcript. These results indicate that specific A. thaliana NADP-ME isoforms are able to play an anaplerotic role in vivo and provide a basis for the study on the carboxylating activity of NADP-ME, which may contribute to the synthesis of C4 compounds and redox shuttling in plant cells.

Keywords: Saccharomyces cerevisiae; C4 organic acids; anaplerotic role; malate synthesis; plant metabolism.

MeSH terms

  • Arabidopsis / enzymology*
  • Arabidopsis / genetics
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Carbon Dioxide / metabolism
  • Cloning, Molecular
  • Gene Expression
  • Genetic Complementation Test
  • Genetic Engineering
  • Glucose / metabolism
  • Isoenzymes / genetics
  • Isoenzymes / metabolism
  • Malate Dehydrogenase (NADP+) / genetics*
  • Malate Dehydrogenase (NADP+) / metabolism
  • Malates / metabolism*
  • NAD / metabolism*
  • NADP / metabolism*
  • Plant Leaves / enzymology
  • Plant Leaves / genetics
  • Pyruvic Acid / metabolism*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae / genetics
  • Transformation, Genetic
  • Transgenes

Substances

  • Arabidopsis Proteins
  • Isoenzymes
  • Malates
  • Recombinant Proteins
  • NAD
  • Carbon Dioxide
  • NADP
  • malic acid
  • Pyruvic Acid
  • NADP-ME2 protein, Arabidopsis
  • Malate Dehydrogenase (NADP+)
  • Glucose