Identification of low-molecular-weight vitellogenin 1 (Vg1)-like proteins as nucleotide excision repair (NER) factors in developing zebrafish (Danio rerio) using a transcription-based DNA repair assay

Fish Physiol Biochem. 2017 Apr;43(2):663-676. doi: 10.1007/s10695-016-0321-4. Epub 2017 Jan 10.

Abstract

Nucleotide excision repair (NER) removes helix-distorting DNA lesions such as UV-induced pyrimidine dimers and cisplatin-induced strand crosslinking. Our earlier studies have identified low-molecular-weight proteins homologous to the 150-kDa vitellogenin 1 (Vg1) as UV-damaged DNA-binding factors expressed in developing zebrafish (Danio rerio). This present study explored if Vg1-like proteins also participated in NER in zebrafish. Immunoblot analysis of affinity-captured 12 h post-fertilization (hpf) zebrafish extract proteins showed a transient binding of a 30-kDa Vg1-like polypeptide to UV-damaged DNA. A transcription-based in vitro repair assay revealed a significant up-regulation of UVC or cisplatin-suppressed transcriptional activity of a marker cDNA driven by a SP6 RNA polymerase-regulated promotor after incubating the damaged plasmid with the extracts of 12 hpf embryos or 96 hpf larvae. The up-regulation of UV or cisplatin-suppressed transcription was abolished in the presence of a monoclonal anti-zebrafish Vg1 antibody. The differential sensitivity of UV-induced repair in 12 and 96 hpf zebrafish extracts to exogenous ATP suggested a development-dependent expression of Vg1-like NER factors. A T4 endonuclease V digestion assay showed no inhibition of the anti-Vg1 antibody on the excision of UV-induced cyclobutane pyrimidine dimers. Our results identified the participation of Vg1-like factors in NER in developing zebrafish, and these factors may function at post-incison steps of NER.

Keywords: Cisplatin; Nucleotide excision repair; Protein; UV; Vitellogenin; Zebrafish.

MeSH terms

  • Adenosine Triphosphate / metabolism
  • Animals
  • Biological Assay
  • Cisplatin / pharmacology
  • DNA Damage
  • DNA Repair*
  • Embryo, Nonmammalian / metabolism
  • Molecular Weight
  • Transcription, Genetic / drug effects
  • Ultraviolet Rays
  • Vitellogenins / genetics*
  • Vitellogenins / metabolism
  • Zebrafish / genetics*
  • Zebrafish / metabolism
  • Zebrafish Proteins / genetics*
  • Zebrafish Proteins / metabolism

Substances

  • Vitellogenins
  • Zebrafish Proteins
  • vtg1 protein, zebrafish
  • Adenosine Triphosphate
  • Cisplatin