Structural characterization of human aminoacyl-tRNA synthetases for translational and nontranslational functions

Methods. 2017 Jan 15:113:83-90. doi: 10.1016/j.ymeth.2016.11.014. Epub 2016 Nov 22.

Abstract

Aminoacyl-tRNA synthetases (aaRSs) are enzymes that function at the first step of translation, catalyzing the conjugation of amino acids to their cognate tRNAs for protein synthesis. While preserving this essential role, higher eukaryotic aaRSs, such as human cytoplasmic aaRSs, have developed other functions during evolution, including angiogenesis, inflammation, development, tumorigenesis, etc. These translational and nontranslational functions of aaRSs are attractive targets for developing antibacterial, antifungal, anticancer agents and for treating other human diseases. Structural characterization of aaRS functions in both categories has deepened our understanding and provided insightful platform for further structure-based drug design. The convergence of the mechanism of action, together with their divergent functions, offers a possible protocol for studying these features of aaRSs in general. To guide this objective in future, we provide here a review on the methods used in structural analysis, which may be applied to study this special group of housekeeping proteins.

Keywords: Aminoacyl-tRNA synthetase; LysRS; Protein purification; Structure biology.

Publication types

  • Review

MeSH terms

  • Cell Line, Tumor
  • Cloning, Molecular
  • Crystallography, X-Ray / methods
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism
  • Humans
  • Lymphocytes / chemistry
  • Lymphocytes / cytology
  • Lymphocytes / enzymology
  • Lysine / chemistry*
  • Lysine / metabolism
  • Lysine-tRNA Ligase / chemistry*
  • Lysine-tRNA Ligase / genetics
  • Lysine-tRNA Ligase / metabolism
  • Models, Molecular
  • Nuclear Proteins / chemistry
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism
  • Phosphorylation
  • Protein Processing, Post-Translational*
  • RNA, Transfer, Lys / chemistry*
  • RNA, Transfer, Lys / genetics
  • RNA, Transfer, Lys / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism

Substances

  • AIMP2 protein, human
  • Nuclear Proteins
  • RNA, Transfer, Lys
  • Recombinant Proteins
  • Lysine-tRNA Ligase
  • Lysine