Fluorometabolite biosynthesis: isotopically labelled glycerol incorporations into the antibiotic nucleocidin in Streptomyces calvus

Org Biomol Chem. 2016 Dec 20;15(1):61-64. doi: 10.1039/c6ob02291j.

Abstract

Deuterium and carbon-13 labelled glycerols have been fed to Streptomyces calvus fermentations and isotope incorporation into the fluorine containing antibiotic nucleocidin have been evaluated by 19F-NMR. A single deuterium atom was incorporated from [2H5]- and (R)-[2H2]-glycerol into C-5' of the antibiotic, suggesting that an oxidation occurs at this carbon after ribose ring assembly from glycerol (pentose phosphate pathway), during nucleocidin biosynthesis.

MeSH terms

  • Adenosine / analogs & derivatives*
  • Adenosine / metabolism
  • Anti-Bacterial Agents / metabolism*
  • Biosynthetic Pathways
  • Carbon Isotopes / metabolism
  • Deuterium / metabolism
  • Fermentation
  • Fluorine / metabolism
  • Glycerol / metabolism*
  • Isotope Labeling
  • Magnetic Resonance Spectroscopy
  • Streptomyces / metabolism*

Substances

  • Anti-Bacterial Agents
  • Carbon Isotopes
  • Fluorine
  • Deuterium
  • nucleocidin
  • Carbon-13
  • Adenosine
  • Glycerol