DciA is an ancestral replicative helicase operator essential for bacterial replication initiation

Nat Commun. 2016 Nov 10:7:13271. doi: 10.1038/ncomms13271.

Abstract

Delivery of the replicative helicase onto DNA is an essential step in the initiation of replication. In bacteria, DnaC (in Escherichia coli) and DnaI (in Bacillus subtilis) are representative of the two known mechanisms that assist the replicative helicase at this stage. Here, we establish that these two strategies cannot be regarded as prototypical of the bacterial domain since dnaC and dnaI (dna[CI]) are present in only a few bacterial phyla. We show that dna[CI] was domesticated at least seven times through evolution in bacteria and at the expense of one gene, which we rename dciA (dna[CI] antecedent), suggesting that DciA and Dna[CI] share a common function. We validate this hypothesis by establishing in Pseudomonas aeruginosa that DciA possesses the attributes of the replicative helicase-operating proteins associated with replication initiation.

MeSH terms

  • Bacteria / classification
  • Bacteria / enzymology
  • Bacteria / genetics
  • Bacterial Proteins / classification
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • DNA Helicases / classification
  • DNA Helicases / genetics*
  • DNA Helicases / metabolism
  • DNA Replication*
  • DNA, Bacterial / genetics
  • DNA, Bacterial / metabolism
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Genome, Bacterial / genetics
  • Operator Regions, Genetic*
  • Phylogeny

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • DnaC protein, E coli
  • DnaI protein, Bacillus subtilis
  • Escherichia coli Proteins
  • DNA Helicases