CRISPR/Cas-Mediated Knockin in Human Pluripotent Stem Cells

Methods Mol Biol. 2017:1513:119-140. doi: 10.1007/978-1-4939-6539-7_9.

Abstract

Fluorescent reporter and epitope-tagged human pluripotent stem cells (hPSCs) greatly facilitate studies on the pluripotency and differentiation characteristics of these cells. Unfortunately traditional procedures to generate such lines are hampered by a low targeting efficiency that necessitates a lengthy process of selection followed by the removal of the selection cassette. Here we describe a procedure to generate fluorescent reporter and epitope tagged hPSCs in an efficient one-step process using the CRISPR/Cas technology. Although the method described uses our recently developed iCRISPR platform, the protocols can be adapted for general use with CRISPR/Cas or other engineered nucleases. The transfection procedures described could also be used for additional applications, such as overexpression or lineage tracing studies.

Keywords: CRISPR/Cas; Epitope tag; Fluorescent reporter; Gene targeting; Homologous recombination; Human pluripotent stem cells (hPSCs); Knockin.

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • CRISPR-Associated Protein 9
  • CRISPR-Cas Systems*
  • Clustered Regularly Interspaced Short Palindromic Repeats
  • Doxycycline / pharmacology
  • Endonucleases / genetics
  • Endonucleases / metabolism
  • Epitopes / genetics
  • Epitopes / metabolism
  • Gene Knock-In Techniques*
  • Genes, Reporter
  • Genetic Loci
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism*
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Homologous Recombination
  • Humans
  • Lipids / pharmacology
  • Luminescent Proteins / genetics
  • Luminescent Proteins / metabolism
  • Pluripotent Stem Cells / cytology
  • Pluripotent Stem Cells / drug effects
  • Pluripotent Stem Cells / metabolism*
  • RNA, Guide, CRISPR-Cas Systems / genetics
  • RNA, Guide, CRISPR-Cas Systems / metabolism
  • Transfection / methods*

Substances

  • Bacterial Proteins
  • Epitopes
  • Lipids
  • Lipofectamine
  • Luminescent Proteins
  • RNA, Guide, CRISPR-Cas Systems
  • fluorescent protein 583
  • Green Fluorescent Proteins
  • CRISPR-Associated Protein 9
  • Cas9 endonuclease Streptococcus pyogenes
  • Endonucleases
  • Doxycycline