Direct Regulation of Alternative Splicing by SMAD3 through PCBP1 Is Essential to the Tumor-Promoting Role of TGF-β

Mol Cell. 2016 Nov 3;64(3):549-564. doi: 10.1016/j.molcel.2016.09.013. Epub 2016 Oct 13.

Abstract

In advanced stages of cancers, TGF-β promotes tumor progression in conjunction with inputs from receptor tyrosine kinase pathways. However, mechanisms that underpin the signaling cooperation and convert TGF-β from a potent growth inhibitor to a tumor promoter are not fully understood. We report here that TGF-β directly regulates alternative splicing of cancer stem cell marker CD44 through a phosphorylated T179 of SMAD3-mediated interaction with RNA-binding protein PCBP1. We show that TGF-β and EGF respectively induce SMAD3 and PCBP1 to colocalize in SC35-positive nuclear speckles, and the two proteins interact in the variable exon region of CD44 pre-mRNA to inhibit spliceosome assembly in favor of expressing the mesenchymal isoform CD44s over the epithelial isoform CD44E. We further show that the SMAD3-mediated alternative splicing is essential to the tumor-promoting role of TGF-β and has a global influence on protein products of genes instrumental to epithelial-to-mesenchymal transition and metastasis.

Keywords: CD44; EMT; PCBP1; SMAD3; TGF-β; alternative splicing; metastasis.

MeSH terms

  • Alternative Splicing / drug effects*
  • Animals
  • Cell Line, Tumor
  • DNA-Binding Proteins
  • Epidermal Growth Factor / metabolism
  • Epidermal Growth Factor / pharmacology
  • Epithelial-Mesenchymal Transition / drug effects*
  • Exons
  • Female
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic*
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics*
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism
  • Humans
  • Hyaluronan Receptors / genetics*
  • Hyaluronan Receptors / metabolism
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / metabolism
  • Lung Neoplasms / pathology
  • Mice
  • Mice, Nude
  • Neoplasm Transplantation
  • Neoplastic Stem Cells / drug effects
  • Neoplastic Stem Cells / metabolism
  • Neoplastic Stem Cells / pathology
  • Phosphorylation / drug effects
  • Promoter Regions, Genetic
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • RNA Precursors / genetics
  • RNA Precursors / metabolism
  • RNA-Binding Proteins
  • Signal Transduction
  • Smad3 Protein / genetics*
  • Smad3 Protein / metabolism
  • Threonine / metabolism
  • Transforming Growth Factor beta / metabolism
  • Transforming Growth Factor beta / pharmacology

Substances

  • CD44 protein, human
  • DNA-Binding Proteins
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Hyaluronan Receptors
  • PCBP1 protein, human
  • Protein Isoforms
  • RNA Precursors
  • RNA-Binding Proteins
  • SMAD3 protein, human
  • Smad3 Protein
  • Transforming Growth Factor beta
  • Threonine
  • Epidermal Growth Factor