Non-racemic mixture model: a computational approach

Acta Biochim Pol. 2017;64(1):17-19. doi: 10.18388/abp.2015_1119. Epub 2016 Oct 14.

Abstract

The behavior of a slight chiral bias in favor of l-amino acids over d-amino acids was studied in an evolutionary mathematical model generating mixed chiral peptide hexamers. The simulations aimed to reproduce a very generalized prebiotic scenario involving a specified couple of amino acid enantiomers and a possible asymmetric amplification through autocatalytic peptide self-replication while forming small multimers of a defined length. Our simplified model allowed the observation of a small ascending but not conclusive tendency in the l-amino acid over the d-amino acid profile for the resulting mixed chiral hexamers in computer simulations of 100 peptide generations. This simulation was carried out by changing the chiral bias from 1% to 3%, in three stages of 15, 50 and 100 generations to observe any alteration that could mean a drastic change in behavior. So far, our simulations lead to the assumption that under the exposure of very slight non-racemic conditions, a significant bias between l- and d-amino acids, as present in our biosphere, was unlikely generated under prebiotic conditions if autocatalytic peptide self-replication was the main or the only driving force of chiral auto-amplification.

Keywords: amino acids; chiral asymmetry; origin of homochirality; prebiotic peptide formation.

MeSH terms

  • Amino Acids / chemistry*
  • Catalysis
  • Evolution, Chemical*
  • Models, Theoretical*
  • Peptides / chemistry
  • Prebiotics
  • Stereoisomerism*

Substances

  • Amino Acids
  • Peptides
  • Prebiotics