Biomarker Discovery by Modeling Behçet's Disease with Patient-Specific Human Induced Pluripotent Stem Cells

Stem Cells Dev. 2017 Jan 15;26(2):133-145. doi: 10.1089/scd.2016.0181. Epub 2016 Nov 16.

Abstract

Behçet's disease (BD) is a chronic inflammatory and multisystemic autoimmune disease of unknown etiology. Due to the lack of a specific test for BD, its diagnosis is very difficult and therapeutic options are limited. Induced pluripotent stem cell (iPSC) technology, which provides inaccessible disease-relevant cell types, opens a new era for disease treatment. In this study, we generated BD iPSCs from patient somatic cells and differentiated them into hematopoietic precursor cells (BD iPSC-HPCs) as BD model cells. Based on comparative transcriptome analysis using our BD model cells, we identified eight novel BD-specific genes, AGTR2, CA9, CD44, CXCL1, HTN3, IL-2, PTGER4, and TSLP, which were differentially expressed in BD patients compared with healthy controls or patients with other immune diseases. The use of CXCL1 as a BD biomarker was further validated at the protein level using both a BD iPSC-HPC-based assay system and BD patient serum samples. Furthermore, we show that our BD iPSC-HPC-based drug screening system is highly effective for testing CXCL1 BD biomarkers, as determined by monitoring the efficacy of existing anti-inflammatory drugs. Our results shed new light on the usefulness of patient-specific iPSC technology in the development of a benchmarking platform for disease-specific biomarkers, phenotype- or target-driven drug discovery, and patient-tailored therapies.

Keywords: Behçet's disease; CXCL1; biomarker; drug discovery; hematopoietic precursor cells; induced pluripotent stem cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Behcet Syndrome / genetics
  • Behcet Syndrome / metabolism*
  • Biomarkers / metabolism*
  • Cell Differentiation
  • Chemokine CXCL1 / metabolism
  • Female
  • Gene Expression Profiling
  • Hematopoietic Stem Cells / metabolism
  • High-Throughput Screening Assays
  • Humans
  • Induced Pluripotent Stem Cells / cytology*
  • Male
  • Middle Aged
  • Models, Biological
  • Reproducibility of Results
  • Transcriptome / genetics

Substances

  • Biomarkers
  • Chemokine CXCL1