Nonconventional localizations of cytosolic aminoacyl-tRNA synthetases in yeast and human cells

Methods. 2017 Jan 15:113:91-104. doi: 10.1016/j.ymeth.2016.09.017. Epub 2016 Oct 7.

Abstract

By definition, cytosolic aminoacyl-tRNA synthetases (aaRSs) should be restricted to the cytosol of eukaryotic cells where they supply translating ribosomes with their aminoacyl-tRNA substrates. However, it has been shown that other translationally-active compartments like mitochondria and plastids can simultaneously contain the cytosolic aaRS and its corresponding organellar ortholog suggesting that both forms do not share the same organellar function. In addition, a fair number of cytosolic aaRSs have also been found in the nucleus of cells from several species. Hence, these supposedly cytosolic-restricted enzymes have instead the potential to be multi-localized. As expected, in all examples that were studied so far, when the cytosolic aaRS is imported inside an organelle that already contains its bona fide corresponding organellar-restricted aaRSs, the cytosolic form was proven to exert a nonconventional and essential function. Some of these essential functions include regulating homeostasis and protecting against various stresses. It thus becomes critical to assess meticulously the subcellular localization of each of these cytosolic aaRSs to unravel their additional roles. With this objective in mind, we provide here a review on what is currently known about cytosolic aaRSs multi-compartmentalization and we describe all commonly used protocols and procedures for identifying the compartments in which cytosolic aaRSs relocalize in yeast and human cells.

Keywords: Fractionation; Human; MTS; Microscopy; NLS; Yeast; aaRS; tRNA.

Publication types

  • Review

MeSH terms

  • Amino Acyl-tRNA Synthetases / classification
  • Amino Acyl-tRNA Synthetases / genetics
  • Amino Acyl-tRNA Synthetases / metabolism*
  • Antibodies / chemistry
  • Blotting, Western / methods
  • Cell Compartmentation
  • Cell Fractionation / methods
  • Cell Line
  • Cell Nucleus / enzymology*
  • Cell Nucleus / ultrastructure
  • Cytosol / enzymology*
  • Cytosol / ultrastructure
  • Fluorescent Antibody Technique / methods
  • Gene Expression
  • Humans
  • Mitochondria / enzymology*
  • Mitochondria / ultrastructure
  • Protein Transport
  • Ribosomes / enzymology*
  • Ribosomes / ultrastructure
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / ultrastructure

Substances

  • Antibodies
  • Amino Acyl-tRNA Synthetases