Paired Design of dCas9 as a Systematic Platform for the Detection of Featured Nucleic Acid Sequences in Pathogenic Strains

ACS Synth Biol. 2017 Feb 17;6(2):211-216. doi: 10.1021/acssynbio.6b00215. Epub 2016 Oct 11.

Abstract

We developed an in vitro DNA detection system using a pair of dCas9 proteins linked to split halves of luciferase. Luminescence was induced upon colocalization of the reporter pair to a ∼44 bp target sequence defined by sgRNAs. We used the system to detect Mycobacterium tuberculosis DNA with high specificity and sensitivity. The reprogrammability of dCas9 was further leveraged in an array design that accesses sequence information across the entire genome.

Keywords: DNA detection; dCas9; in vitro pathogenic detection; paired design; split luciferase; tuberculosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence / genetics*
  • CRISPR-Cas Systems / genetics
  • DNA, Bacterial / genetics
  • Endonucleases / genetics*
  • Genome, Bacterial / genetics
  • Luciferases / genetics
  • Luminescence
  • Mycobacterium tuberculosis / genetics
  • Nucleic Acids / genetics*
  • Sensitivity and Specificity

Substances

  • DNA, Bacterial
  • Nucleic Acids
  • Luciferases
  • Endonucleases