In vitro evolution of chemically-modified nucleic acid aptamers: Pros and cons, and comprehensive selection strategies

RNA Biol. 2016 Dec;13(12):1232-1245. doi: 10.1080/15476286.2016.1236173. Epub 2016 Oct 7.

Abstract

Nucleic acid aptamers are single-stranded DNA or RNA oligonucleotide sequences that bind to a specific target molecule with high affinity and specificity through their ability to adopt 3-dimensional structure in solution. Aptamers have huge potential as targeted therapeutics, diagnostics, delivery agents and as biosensors. However, aptamers composed of natural nucleotide monomers are quickly degraded in vivo and show poor pharmacodynamic properties. To overcome this, chemically-modified nucleic acid aptamers are developed by incorporating modified nucleotides after or during the selection process by Systematic Evolution of Ligands by EXponential enrichment (SELEX). This review will discuss the development of chemically-modified aptamers and provide the pros and cons, and new insights on in vitro aptamer selection strategies by using chemically-modified nucleic acid libraries.

Keywords: Aptamers; SELEX; chemical antibodies; chemically-modified aptamers; in vitro selection; modified nucleotides; nucleic acid ligands.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Aptamers, Nucleotide / chemical synthesis*
  • Aptamers, Nucleotide / chemistry
  • Aptamers, Nucleotide / pharmacokinetics*
  • Humans
  • Nucleic Acid Conformation
  • SELEX Aptamer Technique
  • Small Molecule Libraries / chemical synthesis
  • Small Molecule Libraries / chemistry
  • Small Molecule Libraries / pharmacokinetics

Substances

  • Aptamers, Nucleotide
  • Small Molecule Libraries