Integrative analysis of signaling pathways and diseases associated with the miR-106b/25 cluster and their function study in berberine-induced multiple myeloma cells

Funct Integr Genomics. 2017 May;17(2-3):253-262. doi: 10.1007/s10142-016-0519-7. Epub 2016 Sep 19.

Abstract

Berberine (BBR), a traditional Chinese herbal medicine compound, has emerged as a novel class of anti-tumor agent. Our previous microRNA (miRNA) microarray demonstrated that miR-106b/25 was significantly down-regulated in BBR-treated multiple myeloma (MM) cells. Here, systematic integration showed that miR-106b/25 cluster is involved in multiple cancer-related signaling pathways and tumorigenesis. MiREnvironment database revealed that multiple environmental factors (drug, ionizing radiation, hypoxia) affected the miR-106b/25 cluster expression. By targeting the seed region in the miRNA, tiny anti-mir106b/25 cluster (t-anti-mir106b/25 cluster) significantly induced suppression in cell viability and colony formation. Western blot validated that t-anti-miR-106b/25 cluster effectively inhibited the expression of P38 MAPK and phospho-P38 MAPK in MM cells. These findings indicated the miR-106b/25 cluster functioned as oncogene and might provide a novel molecular insight into MM.

Keywords: Berberine; MiR-106b/25 cluster; Multiple myeloma; Signaling pathways; p38 MAPK.

MeSH terms

  • Berberine / pharmacology*
  • Cell Line, Tumor
  • Humans
  • MicroRNAs / genetics*
  • Multiple Myeloma / pathology*
  • Signal Transduction*

Substances

  • MIRN106 microRNA, human
  • MicroRNAs
  • Berberine