Rapid and not culture-dependent assay based on multiplex PCR-SSR analysis for monitoring inoculated yeast strains in industrial wine fermentations

Arch Microbiol. 2017 Jan;199(1):135-143. doi: 10.1007/s00203-016-1287-4. Epub 2016 Sep 8.

Abstract

Wine industry needs a simple method for rapid diagnosis of the dominance of inoculated strains that could be performed routinely during the fermentation process. We present a suitable, high-throughput, and low-cost method to monitor rapidly the dominance of inoculated yeast strains in industrial fermentations of red and white wines using an activated carbon cleaning pretreatment, and a rapid DNA extraction method plus multiplex PCR-SSR analysis. We apply this technique directly to samples of fermenting wines without previously isolating yeast colonies. Results are obtained in a maximum time of 4.5 h.

Keywords: Activated carbon; DNA extraction; Fermentation control; Microsatellite; Saccharomyces cerevisiae.

Publication types

  • Evaluation Study

MeSH terms

  • Fermentation
  • Multiplex Polymerase Chain Reaction / methods*
  • Vitis / metabolism
  • Vitis / microbiology
  • Wine / analysis
  • Wine / microbiology*
  • Yeasts / classification
  • Yeasts / genetics
  • Yeasts / isolation & purification*
  • Yeasts / metabolism