Visualization of single endogenous polysomes reveals the dynamics of translation in live human cells

J Cell Biol. 2016 Sep 12;214(6):769-81. doi: 10.1083/jcb.201605024. Epub 2016 Sep 5.

Abstract

Translation is an essential step in gene expression. In this study, we used an improved SunTag system to label nascent proteins and image translation of single messenger ribonucleoproteins (mRNPs) in human cells. Using a dedicated reporter RNA, we observe that translation of single mRNPs stochastically turns on and off while they diffuse through the cytoplasm. We further measure a ribosome density of 1.3 per kilobase and an elongation rate of 13-18 amino acids per second. Tagging the endogenous POLR2A gene revealed similar elongation rates and ribosomal densities and that nearly all messenger RNAs (mRNAs) are engaged in translation. Remarkably, tagging of the heavy chain of dynein 1 (DYNC1H1) shows this mRNA accumulates in foci containing three to seven RNA molecules. These foci are translation sites and thus represent specialized translation factories. We also observe that DYNC1H1 polysomes are actively transported by motors, which may deliver the mature protein at appropriate cellular locations. The SunTag should be broadly applicable to study translational regulation in live single cells.

Publication types

  • Video-Audio Media

MeSH terms

  • Cytoplasm / metabolism
  • Cytoplasmic Dyneins / biosynthesis*
  • Cytoplasmic Dyneins / genetics
  • Diffusion
  • Fluorescence Recovery After Photobleaching
  • HeLa Cells
  • Humans
  • Image Processing, Computer-Assisted
  • Microscopy, Confocal*
  • Peptide Chain Elongation, Translational
  • Polyribosomes / genetics
  • Polyribosomes / metabolism*
  • Protein Transport
  • RNA Polymerase II / biosynthesis*
  • RNA Polymerase II / genetics
  • Recombinant Fusion Proteins / biosynthesis
  • Recombinant Fusion Proteins / genetics
  • Ribonucleoproteins / genetics
  • Ribonucleoproteins / metabolism*
  • Time Factors
  • Transfection

Substances

  • DYNC1H1 protein, human
  • Recombinant Fusion Proteins
  • Ribonucleoproteins
  • messenger ribonucleoprotein
  • RNA Polymerase II
  • Cytoplasmic Dyneins