Biochemical and structural characterization of quinoprotein aldose sugar dehydrogenase from Thermus thermophilus HJ6: Mutational analysis of Tyr156 in the substrate-binding site

Arch Biochem Biophys. 2016 Oct 15:608:20-6. doi: 10.1016/j.abb.2016.08.022. Epub 2016 Aug 31.

Abstract

The gene encoding a quinoprotein aldose sugar dehydrogenase (ASD) from Thermus thermophilus HJ6 (Tt_ASD) was cloned and sequenced; it comprised 1059 nucleotides encoding a protein containing 352 amino acids that had a predicted molecular mass of 38.9 kDa. The deduced amino acid sequence showed 42.9% and 33.9% identities to the ASD proteins from Pyrobaculum aerophilum and Escherichia coli, respectively. The biochemical properties of Tt_ASD were characterized. The optimum pH for the oxidation of glucose was 7.0-7.5 and the optimum temperature was 70 °C. The half-life of heat inactivation for the apoenzyme was about 25 min at 85 °C. The enzyme was highly thermostable, and the activity of the pyrroloquinoline quinone-bound holoenzyme was not lost after incubation at 85 °C for 100 min. Tt_ASD could oxidize various sugars, including hexoses, pentoses, disaccharides, and polysaccharides, in addition to alcohols. Structural analysis suggested that Tyr156 would be the substrate-binding residue. Two mutants, Y156A and Y156K, had impaired activities and affinities for all substrates and completely lost their activities for alcohols. This structural and mutational analysis of Tt_ASD demonstrates the crucial role of Tyr156 in determining substrate specificity.

Keywords: Alcohol oxidation; Aldose sugar dehydrogenase; Soluble quinoprotein glucose dehydrogenase; Thermus thermophilus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aspartate-Semialdehyde Dehydrogenase / chemistry*
  • Aspartate-Semialdehyde Dehydrogenase / genetics
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Binding Sites
  • DNA Mutational Analysis*
  • Escherichia coli Proteins / genetics
  • Hydrogen-Ion Concentration
  • Kinetics
  • Molecular Conformation
  • Mutation
  • Open Reading Frames
  • PQQ Cofactor / chemistry
  • PQQ Cofactor / genetics
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Substrate Specificity
  • Temperature
  • Thermus thermophilus / enzymology
  • Thermus thermophilus / genetics*
  • Tyrosine / chemistry
  • Tyrosine / genetics

Substances

  • Bacterial Proteins
  • Escherichia coli Proteins
  • Recombinant Proteins
  • Tyrosine
  • PQQ Cofactor
  • Asd protein, E coli
  • Aspartate-Semialdehyde Dehydrogenase